- Predicted Gene MLOC_55912
MLOC_55912 FPKM values
FPKM by Treatment | FPKM by Replicate |
![](/morexGenes/blast_net_images/MLOC_55912_assembly3_WGSMorex_rbca.fasta_treatments.fpkms.png)
| ![](/morexGenes/blast_net_images/MLOC_55912_assembly3_WGSMorex_rbca.fasta_replicates.fpkms.png)
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Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
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EMB | 4-day embryos dissected from germinating grains | 27.0569 | 28.3966 | 28.1841 | 26.1045 |
LEA | Shoots from the seedlings (10 cm shoot stage) | 14.2418 | 9.31508 | 5.32146 | 7.35063 |
INF1 | Young developing inflorescences (5mm) | 38.2815 | 31.5909 | 26.6728 | 26.4136 |
INF2 | Developing inflorescences (1-1.5 cm) | 24.5623 | 22.1568 | 24.6933 | 25.2977 |
ROO | Roots from the seedlings (10 cm shoot stage) | 9.58702 | 24.2862 | 37.0489 | 23.8882 |
NOD | Developing tillers at six leaf stage, 3rd internode | 7.34936 | 2.99679 | 7.25726 | 9.35076 |
CAR5 | Developing grain, bracts removed (5 DPA) | 24.3254 | 26.8448 | 25.2446 | 24.6741 |
CAR15 | Developing grain, bracts removed (15 DPA) | 6.77693 | 7.56793 | 5.28433 | 15.9074 |
CDS Structure of MLOC_55912
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_55912.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
Database | Hit | Frame | E-value | Score | % Identity | Description |
---|
Rice PP6 |
LOC_Os01g69250.4 |
+3 |
2e-23 |
96 |
43/51 (84%) |
13101.m07566 protein mitochondrial import receptor subunit TOM20, putative, expressed |
TAIR PP10 |
AT5G40930.1 |
+3 |
7e-11 |
61 |
29/47 (62%) |
| Symbols: TOM20-4 | translocase of outer membrane 20-4 | chr5:16404523-16405825 FORWARD LENGTH=187 |