- Predicted Gene MLOC_55911
MLOC_55911 FPKM values
| FPKM by Treatment | FPKM by Replicate |
|---|
| 
|
| Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
|---|
| EMB | 4-day embryos dissected from germinating grains | 19.3452 | 22.8051 | 22.0289 | 25.3635 |
| LEA | Shoots from the seedlings (10 cm shoot stage) | 17.1713 | 18.4718 | 16.7267 | 15.9853 |
| INF1 | Young developing inflorescences (5mm) | 19.8472 | 24.616 | 26.4308 | 22.8008 |
| INF2 | Developing inflorescences (1-1.5 cm) | 23.8972 | 29.9544 | 26.7302 | 34.0605 |
| ROO | Roots from the seedlings (10 cm shoot stage) | 37.8606 | 40.0552 | 35.2325 | 54.1488 |
| NOD | Developing tillers at six leaf stage, 3rd internode | 28.3858 | 38.2177 | 35.4796 | 130.96 |
| CAR5 | Developing grain, bracts removed (5 DPA) | 12.6245 | 12.3518 | 12.4766 | 14.192 |
| CAR15 | Developing grain, bracts removed (15 DPA) | 7.68047 | 6.39686 | 7.29423 | 18.7354 |
CDS Structure of MLOC_55911
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_55911.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
| Database | Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Rice PP6 |
LOC_Os01g69230.1 |
+1 |
0.0 |
911 |
508/656 (77%) |
13101.m07561 protein exo70 exocyst complex subunit domain containing protein, expressed |
| TAIR PP10 |
AT5G50380.1 |
+1 |
5e-164 |
496 |
282/566 (50%) |
| Symbols: ATEXO70F1, EXO70F1 | exocyst subunit exo70 family protein F1 | chr5:20516382-20518433 REVERSE LENGTH=683 |
