MLOC_5590 FPKM values
| FPKM by Treatment | FPKM by Replicate |
|---|
| 
|
| Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
|---|
| EMB | 4-day embryos dissected from germinating grains | 0.590158 | 0.0794191 | 0.213815 | 0.243355 |
| LEA | Shoots from the seedlings (10 cm shoot stage) | 0 | 0.0748767 | 0 | 0.0591442 |
| INF1 | Young developing inflorescences (5mm) | 13.5845 | 9.52152 | 5.19758 | 8.40289 |
| INF2 | Developing inflorescences (1-1.5 cm) | 0.422433 | 0.0947809 | 0 | 0.321063 |
| ROO | Roots from the seedlings (10 cm shoot stage) | 0.0905983 | 0.100089 | 0 | 0.151224 |
| NOD | Developing tillers at six leaf stage, 3rd internode | 0.59037 | 0.308997 | 0.0217745 | 0.588792 |
| CAR5 | Developing grain, bracts removed (5 DPA) | 0.599739 | 0.189476 | 0.114931 | 0.297686 |
| CAR15 | Developing grain, bracts removed (15 DPA) | 0 | 0.0667174 | 0.0407927 | 0.21642 |
CDS Structure of MLOC_5590
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_5590.3
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
| Database | Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Rice PP6 |
LOC_Os05g07010.2 |
-2 |
1e-45 |
161 |
106/218 (49%) |
13105.m00756 protein myb-like DNA-binding domain containing protein, expressed |
| TAIR PP10 |
AT1G01520.1 |
-2 |
8e-24 |
100 |
44/65 (68%) |
Homeodomain-like superfamily protein | chr1:190596-192139 FORWARD LENGTH=287 |
