- Predicted Gene MLOC_55892
MLOC_55892 FPKM values
| FPKM by Treatment | FPKM by Replicate |
|---|
| 
|
| Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
|---|
| EMB | 4-day embryos dissected from germinating grains | 9.80861 | 12.7315 | 13.2987 | 11.4386 |
| LEA | Shoots from the seedlings (10 cm shoot stage) | 8.47776 | 9.96089 | 10.4096 | 7.92395 |
| INF1 | Young developing inflorescences (5mm) | 6.06699 | 5.98914 | 7.02882 | 4.85553 |
| INF2 | Developing inflorescences (1-1.5 cm) | 6.39166 | 5.94596 | 6.1908 | 6.29858 |
| ROO | Roots from the seedlings (10 cm shoot stage) | 4.48089 | 6.82722 | 6.84659 | 7.50872 |
| NOD | Developing tillers at six leaf stage, 3rd internode | 10.9682 | 14.4547 | 11.4019 | 45.3647 |
| CAR5 | Developing grain, bracts removed (5 DPA) | 3.14725 | 2.75801 | 3.23365 | 2.70827 |
| CAR15 | Developing grain, bracts removed (15 DPA) | 2.60485 | 3.08251 | 3.00341 | 5.82656 |
CDS Structure of MLOC_55892
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_55892.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
| Database | Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Rice PP6 |
LOC_Os02g47860.2 |
-3 |
0.0 |
1131 |
569/653 (87%) |
13102.m05402 protein uridine kinase, putative, expressed |
| TAIR PP10 |
AT1G26190.1 |
-3 |
0.0 |
870 |
452/662 (68%) |
Phosphoribulokinase / Uridine kinase family | chr1:9057285-9060433 REVERSE LENGTH=674 |
