- Predicted Gene MLOC_55891
MLOC_55891 FPKM values
| FPKM by Treatment | FPKM by Replicate |

| 
|
| Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
|---|
| EMB | 4-day embryos dissected from germinating grains | 61.92 | 44.3843 | 46.7443 | 48.1881 |
| LEA | Shoots from the seedlings (10 cm shoot stage) | 34.1112 | 33.3908 | 48.7783 | 30.6831 |
| INF1 | Young developing inflorescences (5mm) | 61.4982 | 76.1884 | 84.4467 | 62.7058 |
| INF2 | Developing inflorescences (1-1.5 cm) | 88.6208 | 87.4544 | 96.5656 | 97.2293 |
| ROO | Roots from the seedlings (10 cm shoot stage) | 102.199 | 57.3021 | 68.6697 | 73.3146 |
| NOD | Developing tillers at six leaf stage, 3rd internode | 49.383 | 71.4581 | 112.706 | 221.152 |
| CAR5 | Developing grain, bracts removed (5 DPA) | 64.8357 | 79.4949 | 58.2069 | 66.1888 |
| CAR15 | Developing grain, bracts removed (15 DPA) | 23.9639 | 18.4505 | 18.5942 | 49.6746 |
CDS Structure of MLOC_55891
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_55891.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
| Database | Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Rice PP6 |
LOC_Os02g47870.1 |
+2 |
2e-67 |
209 |
91/92 (99%) |
13102.m05403 protein anaphase-promoting complex subunit 11, putative, expressed |
| TAIR PP10 |
AT5G20570.1 |
+2 |
2e-66 |
206 |
90/92 (98%) |
| Symbols: ROC1, RBX1, HRT1, ATRBX1 | RING-box 1 | chr5:6956905-6958221 REVERSE LENGTH=118 |