MLOC_5589 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains6.4766315.498412.327713.1192
LEAShoots from the seedlings (10 cm shoot stage)16.975416.04715.295514.6178
INF1Young developing inflorescences (5mm)29.422329.702828.203924.6928
INF2Developing inflorescences (1-1.5 cm)31.408429.815829.393434.4546
ROORoots from the seedlings (10 cm shoot stage)5.1026811.08948.3835113.3278
NODDeveloping tillers at six leaf stage, 3rd internode6.27778.258999.0116329.3666
CAR5Developing grain, bracts removed (5 DPA)17.232717.635520.580618.9664
CAR15Developing grain, bracts removed (15 DPA)8.36368.039017.2498618.53



CDS Structure of MLOC_5589






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by AK370650
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK370650CUST_21988_PI427708080NoneNoneNone
MLOC_50118.1NoneAvailableNonecontig_354985 (Not mapped)
MLOC_5589.1NoneAvailableAvailablecontig_136420 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6None-----
TAIR PP10None-----