- Predicted Gene MLOC_55872
MLOC_55872 FPKM values
| FPKM by Treatment | FPKM by Replicate |

| 
|
| Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
|---|
| EMB | 4-day embryos dissected from germinating grains | 2.20388 | 5.45018 | 4.04122 | 3.85101 |
| LEA | Shoots from the seedlings (10 cm shoot stage) | 6.75128 | 6.6515 | 8.99393 | 5.9249 |
| INF1 | Young developing inflorescences (5mm) | 3.67597 | 3.3503 | 3.5892 | 2.65833 |
| INF2 | Developing inflorescences (1-1.5 cm) | 6.26515 | 5.88596 | 5.88835 | 6.06906 |
| ROO | Roots from the seedlings (10 cm shoot stage) | 4.01488 | 5.58788 | 3.57244 | 5.65927 |
| NOD | Developing tillers at six leaf stage, 3rd internode | 1.93502 | 2.7794 | 3.02099 | 9.0077 |
| CAR5 | Developing grain, bracts removed (5 DPA) | 7.12347 | 6.30702 | 7.21738 | 5.92962 |
| CAR15 | Developing grain, bracts removed (15 DPA) | 8.47639 | 8.60668 | 8.37991 | 16.9763 |
CDS Structure of MLOC_55872
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_55872.12
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
| Database | Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Rice PP6 |
LOC_Os08g30770.1 |
+1 |
0.0 |
1342 |
683/949 (72%) |
13108.m03185 protein ABC transporter, ATP-binding protein, putative, expressed |
| TAIR PP10 |
AT3G47780.1 |
+1 |
0.0 |
1029 |
531/941 (56%) |
| Symbols: ATATH6, ATH6 | ABC2 homolog 6 | chr3:17624500-17628972 FORWARD LENGTH=935 |