- Predicted Gene MLOC_55868
MLOC_55868 FPKM values
| FPKM by Treatment | FPKM by Replicate |

| 
|
| Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
|---|
| EMB | 4-day embryos dissected from germinating grains | 0.0655483 | 0 | 0 | 0.104995 |
| LEA | Shoots from the seedlings (10 cm shoot stage) | 0.101541 | 0 | 0.0461316 | 0.0738479 |
| INF1 | Young developing inflorescences (5mm) | 1.2082 | 1.2803 | 1.88325 | 1.29632 |
| INF2 | Developing inflorescences (1-1.5 cm) | 5.53146 | 4.71452 | 4.94257 | 5.89235 |
| ROO | Roots from the seedlings (10 cm shoot stage) | 0.115169 | 0.06219 | 0.184499 | 0.119388 |
| NOD | Developing tillers at six leaf stage, 3rd internode | 0.0481887 | 0.153 | 0.100084 | 0.521411 |
| CAR5 | Developing grain, bracts removed (5 DPA) | 4.28438 | 4.20965 | 4.69247 | 4.61253 |
| CAR15 | Developing grain, bracts removed (15 DPA) | 0.591258 | 0.658487 | 0.454617 | 1.4814 |
CDS Structure of MLOC_55868
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_55868.3
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
| Database | Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Rice PP6 |
LOC_Os02g10640.1 |
-1 |
0.0 |
606 |
301/378 (80%) |
13102.m01186 protein 26S protease regulatory subunit, putative, expressed |
| TAIR PP10 |
AT5G43010.1 |
-1 |
0.0 |
595 |
294/378 (78%) |
| Symbols: RPT4A | regulatory particle triple-A ATPase 4A | chr5:17248563-17251014 REVERSE LENGTH=399 |