- Predicted Gene MLOC_55849
MLOC_55849 FPKM values
| FPKM by Treatment | FPKM by Replicate |

| 
|
| Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
|---|
| EMB | 4-day embryos dissected from germinating grains | 12.9394 | 12.1507 | 11.8657 | 12.9711 |
| LEA | Shoots from the seedlings (10 cm shoot stage) | 16.9518 | 11.7694 | 12.2154 | 12.1064 |
| INF1 | Young developing inflorescences (5mm) | 5.20962 | 3.98033 | 4.16352 | 4.07508 |
| INF2 | Developing inflorescences (1-1.5 cm) | 5.77941 | 5.67161 | 6.13175 | 6.79139 |
| ROO | Roots from the seedlings (10 cm shoot stage) | 4.35954 | 3.37869 | 4.93209 | 4.67643 |
| NOD | Developing tillers at six leaf stage, 3rd internode | 3.21011 | 4.61972 | 4.78063 | 14.58 |
| CAR5 | Developing grain, bracts removed (5 DPA) | 6.46914 | 6.32533 | 6.29185 | 6.68113 |
| CAR15 | Developing grain, bracts removed (15 DPA) | 2.82078 | 3.11115 | 3.41652 | 7.69385 |
CDS Structure of MLOC_55849
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_55849.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
| Database | Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Rice PP6 |
LOC_Os02g33500.1 |
+1 |
0.0 |
1119 |
566/672 (84%) |
13102.m03632 protein threonyl-tRNA synthetase, putative, expressed |
| TAIR PP10 |
AT2G04842.1 |
+1 |
0.0 |
1040 |
481/583 (83%) |
| Symbols: EMB2761 | threonyl-tRNA synthetase, putative / threonine--tRNA ligase, putative | chr2:1698466-1701271 REVERSE LENGTH=650 |