MLOC_55847 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains2.367252.312132.222381.99079
LEAShoots from the seedlings (10 cm shoot stage)3.294080.3695711.773111.33628
INF1Young developing inflorescences (5mm)0.09418530.1156250.2380080.13373
INF2Developing inflorescences (1-1.5 cm)00.189150.05484860.152728
ROORoots from the seedlings (10 cm shoot stage)1.975861.985192.154441.8208
NODDeveloping tillers at six leaf stage, 3rd internode2.72243.90665.347438.84039
CAR5Developing grain, bracts removed (5 DPA)0.2347210.4503450.3919750.349394
CAR15Developing grain, bracts removed (15 DPA)0.2730430.0944750.277290.527779



CDS Structure of MLOC_55847






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_55847.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK358650NoneNoneNoneNone
MLOC_55847.1CUST_3499_PI427708080AvailableAvailablecontig_40319 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os01g08670.1 +3 1e-47 162 105/165 (64%) 13101.m00909 protein expressed protein
TAIR PP10None-----