- Predicted Gene MLOC_55846
MLOC_55846 FPKM values
| FPKM by Treatment | FPKM by Replicate |

| 
|
| Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
|---|
| EMB | 4-day embryos dissected from germinating grains | 8.67175 | 13.9591 | 11.774 | 11.4027 |
| LEA | Shoots from the seedlings (10 cm shoot stage) | 8.47317 | 4.58259 | 4.76399 | 4.8841 |
| INF1 | Young developing inflorescences (5mm) | 35.9577 | 40.9493 | 46.8394 | 32.1492 |
| INF2 | Developing inflorescences (1-1.5 cm) | 44.4647 | 45.6747 | 45.0486 | 48.359 |
| ROO | Roots from the seedlings (10 cm shoot stage) | 5.35441 | 10.0737 | 7.93417 | 10.2577 |
| NOD | Developing tillers at six leaf stage, 3rd internode | 4.87682 | 6.60513 | 8.70035 | 22.5602 |
| CAR5 | Developing grain, bracts removed (5 DPA) | 14.3891 | 15.9986 | 15.1288 | 14.5069 |
| CAR15 | Developing grain, bracts removed (15 DPA) | 9.58275 | 8.9394 | 8.67981 | 20.7589 |
CDS Structure of MLOC_55846
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_55846.2
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
| Database | Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Rice PP6 |
LOC_Os01g08680.2 |
+1 |
4e-156 |
466 |
278/486 (57%) |
13101.m00911 protein myb/SANT domain protein, putative, expressed |
| TAIR PP10 |
AT2G36960.2 |
+1 |
3e-49 |
185 |
138/406 (34%) |
| Symbols: TKI1 | TSL-kinase interacting protein 1 | chr2:15523552-15527245 FORWARD LENGTH=741 |