MLOC_55817 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains11.787920.51218.919316.7576
LEAShoots from the seedlings (10 cm shoot stage)26.864532.093630.353424.9374
INF1Young developing inflorescences (5mm)34.211834.634835.526526.8494
INF2Developing inflorescences (1-1.5 cm)50.943451.694148.529752.2603
ROORoots from the seedlings (10 cm shoot stage)12.311520.483117.117522.3991
NODDeveloping tillers at six leaf stage, 3rd internode18.816725.999423.828285.7947
CAR5Developing grain, bracts removed (5 DPA)40.240537.65841.775235.925
CAR15Developing grain, bracts removed (15 DPA)35.440533.111333.582670.9075



CDS Structure of MLOC_55817






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by AK365864
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK365864CUST_21179_PI427708080NoneNoneNone
MLOC_30887.1NoneAvailableNonecontig_213652 (Mapped)
MLOC_55817.1NoneAvailableAvailablecontig_40289 (Mapped)
MLOC_72867.1NoneAvailableNonecontig_62529 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6None-----
TAIR PP10None-----