- Predicted Gene MLOC_55804
MLOC_55804 FPKM values
| FPKM by Treatment | FPKM by Replicate |
| There are no FPKM-by-treatment values calculated for this gene.
| 
|
| Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
|---|
| EMB | 4-day embryos dissected from germinating grains | 0.508957 | 0.163049 | 0.15511 | 0 |
| LEA | Shoots from the seedlings (10 cm shoot stage) | 0.418172 | 0.328272 | 0.453406 | 0 |
| INF1 | Young developing inflorescences (5mm) | 0.0844234 | 0 | 0 | 0 |
| INF2 | Developing inflorescences (1-1.5 cm) | 0.0226099 | 0 | 0.0605903 | 0 |
| ROO | Roots from the seedlings (10 cm shoot stage) | 1.12948 | 1.51497 | 1.74802 | 0 |
| NOD | Developing tillers at six leaf stage, 3rd internode | 2.21406 | 3.95259 | 0.717222 | 0 |
| CAR5 | Developing grain, bracts removed (5 DPA) | 0 | 0.0532987 | 0.0260653 | 0 |
| CAR15 | Developing grain, bracts removed (15 DPA) | 0.111249 | 0 | 0.0263695 | 0 |
CDS Structure of MLOC_55804
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_55804.2
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
| Database | Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Rice PP6 |
LOC_Os03g05440.1 |
-2 |
1e-114 |
352 |
282/397 (71%) |
13103.m00588 protein DUF677 domain containing protein, putative, expressed |
| TAIR PP10 |
AT3G49070.1 |
-2 |
8e-21 |
96 |
49/102 (48%) |
Protein of unknown function (DUF677) | chr3:18192479-18193729 REVERSE LENGTH=416 |