MLOC_55804 FPKM values

FPKM by TreatmentFPKM by Replicate
There are no FPKM-by-treatment values calculated for this gene.


Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains0.5089570.1630490.155110
LEAShoots from the seedlings (10 cm shoot stage)0.4181720.3282720.4534060
INF1Young developing inflorescences (5mm)0.0844234000
INF2Developing inflorescences (1-1.5 cm)0.022609900.06059030
ROORoots from the seedlings (10 cm shoot stage)1.129481.514971.748020
NODDeveloping tillers at six leaf stage, 3rd internode2.214063.952590.7172220
CAR5Developing grain, bracts removed (5 DPA)00.05329870.02606530
CAR15Developing grain, bracts removed (15 DPA)0.11124900.02636950



CDS Structure of MLOC_55804






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_55804.2
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_55804.2CUST_13430_PI427708080AvailableNonecontig_40277 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os03g05440.1 -2 1e-114 352 282/397 (71%) 13103.m00588 protein DUF677 domain containing protein, putative, expressed
TAIR PP10 AT3G49070.1 -2 8e-21 96 49/102 (48%) Protein of unknown function (DUF677) | chr3:18192479-18193729 REVERSE LENGTH=416