MLOC_55803 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains15.063816.680316.874416.5039
LEAShoots from the seedlings (10 cm shoot stage)15.045814.577115.013312.9594
INF1Young developing inflorescences (5mm)32.450929.82425.363125.5476
INF2Developing inflorescences (1-1.5 cm)30.551329.208628.331832.6423
ROORoots from the seedlings (10 cm shoot stage)9.9993413.581114.03916.0275
NODDeveloping tillers at six leaf stage, 3rd internode3.078872.493934.172199.93229
CAR5Developing grain, bracts removed (5 DPA)19.647320.327222.846520.5994
CAR15Developing grain, bracts removed (15 DPA)8.878428.164467.4195219.2972



CDS Structure of MLOC_55803






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_55803.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK248966.1NoneNoneNoneNone
MLOC_55803.1CUST_3489_PI427708080AvailableAvailablecontig_40277 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os08g09210.2 -3 0.0 794 431/524 (82%) 13108.m00966 protein phosphoribosylamine--glycine ligase, putative, expressed
TAIR PP10 AT1G09830.1 -3 0.0 655 346/449 (77%) Glycinamide ribonucleotide (GAR) synthetase | chr1:3192783-3194936 REVERSE LENGTH=532