MLOC_5580 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains13.407313.692715.697113.0739
LEAShoots from the seedlings (10 cm shoot stage)14.909211.594312.533310.8011
INF1Young developing inflorescences (5mm)28.38426.196329.229821.4523
INF2Developing inflorescences (1-1.5 cm)29.236732.441331.004131.0978
ROORoots from the seedlings (10 cm shoot stage)19.715319.670216.669121.9434
NODDeveloping tillers at six leaf stage, 3rd internode3.808597.348367.503723.2803
CAR5Developing grain, bracts removed (5 DPA)27.401428.298129.39924.9084
CAR15Developing grain, bracts removed (15 DPA)7.927547.327736.4291715.1681



CDS Structure of MLOC_5580






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by AK373676
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK373676CUST_22532_PI427708080NoneNoneNone
MLOC_35202.2NoneAvailableNonecontig_246411 (Mapped)
MLOC_5580.1NoneAvailableAvailablecontig_136401 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6None-----
TAIR PP10None-----