MLOC_55796 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains3.281211.879991.793052.37368
LEAShoots from the seedlings (10 cm shoot stage)1.701890.6298861.36241.11157
INF1Young developing inflorescences (5mm)4.240273.816094.971623.89917
INF2Developing inflorescences (1-1.5 cm)3.073183.404273.968294.02397
ROORoots from the seedlings (10 cm shoot stage)1.800161.839782.419172.48408
NODDeveloping tillers at six leaf stage, 3rd internode0.4792980.8257361.07452.85822
CAR5Developing grain, bracts removed (5 DPA)1.016151.456421.625031.50017
CAR15Developing grain, bracts removed (15 DPA)0.4831770.3162650.7023611.2071



CDS Structure of MLOC_55796






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_55796.2
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK376202NoneNoneNoneNone
MLOC_55796.2CUST_3487_PI427708080AvailableAvailablecontig_40271 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os08g41840.1 +1 2e-72 227 125/193 (65%) 13108.m04495 protein expressed protein
TAIR PP10None-----