- Predicted Gene MLOC_55796
MLOC_55796 FPKM values
FPKM by Treatment | FPKM by Replicate |
![](/morexGenes/blast_net_images/MLOC_55796_assembly3_WGSMorex_rbca.fasta_treatments.fpkms.png)
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Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
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EMB | 4-day embryos dissected from germinating grains | 3.28121 | 1.87999 | 1.79305 | 2.37368 |
LEA | Shoots from the seedlings (10 cm shoot stage) | 1.70189 | 0.629886 | 1.3624 | 1.11157 |
INF1 | Young developing inflorescences (5mm) | 4.24027 | 3.81609 | 4.97162 | 3.89917 |
INF2 | Developing inflorescences (1-1.5 cm) | 3.07318 | 3.40427 | 3.96829 | 4.02397 |
ROO | Roots from the seedlings (10 cm shoot stage) | 1.80016 | 1.83978 | 2.41917 | 2.48408 |
NOD | Developing tillers at six leaf stage, 3rd internode | 0.479298 | 0.825736 | 1.0745 | 2.85822 |
CAR5 | Developing grain, bracts removed (5 DPA) | 1.01615 | 1.45642 | 1.62503 | 1.50017 |
CAR15 | Developing grain, bracts removed (15 DPA) | 0.483177 | 0.316265 | 0.702361 | 1.2071 |
CDS Structure of MLOC_55796
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_55796.2
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
Database | Hit | Frame | E-value | Score | % Identity | Description |
---|
Rice PP6 |
LOC_Os08g41840.1 |
+1 |
2e-72 |
227 |
125/193 (65%) |
13108.m04495 protein expressed protein |
TAIR PP10 | None | - | - | - | - | - |