- Predicted Gene MLOC_55795
MLOC_55795 FPKM values
FPKM by Treatment | FPKM by Replicate |
![](/morexGenes/blast_net_images/MLOC_55795_assembly3_WGSMorex_rbca.fasta_treatments.fpkms.png)
| ![](/morexGenes/blast_net_images/MLOC_55795_assembly3_WGSMorex_rbca.fasta_replicates.fpkms.png)
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Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
---|
EMB | 4-day embryos dissected from germinating grains | 72.1989 | 83.3609 | 95.4308 | 87.2876 |
LEA | Shoots from the seedlings (10 cm shoot stage) | 95.802 | 157.07 | 139.389 | 117.725 |
INF1 | Young developing inflorescences (5mm) | 43.5263 | 46.2189 | 48.0449 | 39.2576 |
INF2 | Developing inflorescences (1-1.5 cm) | 40.8257 | 41.34 | 46.7276 | 45.742 |
ROO | Roots from the seedlings (10 cm shoot stage) | 37.0511 | 67.0059 | 65.3696 | 82.3919 |
NOD | Developing tillers at six leaf stage, 3rd internode | 69.5806 | 54.1735 | 58.7071 | 193.781 |
CAR5 | Developing grain, bracts removed (5 DPA) | 68.4619 | 67.324 | 68.5591 | 65.9546 |
CAR15 | Developing grain, bracts removed (15 DPA) | 30.9112 | 33.3059 | 35.0141 | 74.7474 |
CDS Structure of MLOC_55795
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_55795.2
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
Database | Hit | Frame | E-value | Score | % Identity | Description |
---|
Rice PP6 |
LOC_Os08g41830.1 |
+2 |
0.0 |
762 |
365/397 (92%) |
13108.m04494 protein sulfite oxidase, putative, expressed |
TAIR PP10 |
AT3G01910.1 |
+2 |
0.0 |
625 |
289/387 (75%) |
| Symbols: SOX, AT-SO, AtSO | sulfite oxidase | chr3:314919-317274 REVERSE LENGTH=393 |