- Predicted Gene MLOC_55782
MLOC_55782 FPKM values
FPKM by Treatment | FPKM by Replicate |
![](/morexGenes/blast_net_images/MLOC_55782_assembly3_WGSMorex_rbca.fasta_treatments.fpkms.png)
| ![](/morexGenes/blast_net_images/MLOC_55782_assembly3_WGSMorex_rbca.fasta_replicates.fpkms.png)
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Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
---|
EMB | 4-day embryos dissected from germinating grains | 12.5161 | 15.5382 | 14.8739 | 15.6732 |
LEA | Shoots from the seedlings (10 cm shoot stage) | 15.3667 | 16.6674 | 15.5495 | 14.1923 |
INF1 | Young developing inflorescences (5mm) | 26.3833 | 30.6898 | 32.174 | 26.7197 |
INF2 | Developing inflorescences (1-1.5 cm) | 39.522 | 37.3321 | 39.758 | 44.9182 |
ROO | Roots from the seedlings (10 cm shoot stage) | 11.0912 | 16.2652 | 15.692 | 20.4164 |
NOD | Developing tillers at six leaf stage, 3rd internode | 15.6173 | 17.0313 | 19.3777 | 61.8816 |
CAR5 | Developing grain, bracts removed (5 DPA) | 18.9293 | 20.9789 | 21.0913 | 21.3448 |
CAR15 | Developing grain, bracts removed (15 DPA) | 9.1331 | 8.47364 | 8.91677 | 21.9016 |
CDS Structure of MLOC_55782
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_55782.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
Database | Hit | Frame | E-value | Score | % Identity | Description |
---|
Rice PP6 |
LOC_Os06g04640.1 |
+1 |
5e-163 |
473 |
250/332 (75%) |
13106.m00425 protein bromodomain domain containing protein, expressed |
TAIR PP10 |
AT2G34900.1 |
+1 |
9e-86 |
275 |
160/355 (45%) |
| Symbols: GTE01, IMB1, GTE1 | Transcription factor GTE6 | chr2:14723333-14725562 REVERSE LENGTH=386 |