- Predicted Gene MLOC_55781
MLOC_55781 FPKM values
FPKM by Treatment | FPKM by Replicate |
|
|
Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
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EMB | 4-day embryos dissected from germinating grains | 4.45371 | 4.11185 | 4.7696 | 4.62387 |
LEA | Shoots from the seedlings (10 cm shoot stage) | 60.1363 | 126.647 | 134.54 | 96.0427 |
INF1 | Young developing inflorescences (5mm) | 3.88572 | 4.4556 | 4.42834 | 3.86992 |
INF2 | Developing inflorescences (1-1.5 cm) | 2.28864 | 2.68851 | 2.53136 | 3.01117 |
ROO | Roots from the seedlings (10 cm shoot stage) | 4.25182 | 3.36678 | 4.09155 | 4.54401 |
NOD | Developing tillers at six leaf stage, 3rd internode | 15.8136 | 16.9005 | 20.1165 | 61.5149 |
CAR5 | Developing grain, bracts removed (5 DPA) | 8.97349 | 9.92718 | 10.9966 | 10.7696 |
CAR15 | Developing grain, bracts removed (15 DPA) | 2.22637 | 3.24646 | 2.18305 | 6.6153 |
CDS Structure of MLOC_55781
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_55781.5
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
Database | Hit | Frame | E-value | Score | % Identity | Description |
---|
Rice PP6 |
LOC_Os01g48990.1 |
-1 |
0.0 |
660 |
327/389 (84%) |
13101.m05089 protein uncharacterized kinase mug58, putative, expressed |
TAIR PP10 |
AT1G80380.3 |
-1 |
0.0 |
518 |
238/335 (71%) |
P-loop containing nucleoside triphosphate hydrolases superfamily protein | chr1:30217895-30219784 FORWARD LENGTH=364 |