MLOC_55781 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains4.453714.111854.76964.62387
LEAShoots from the seedlings (10 cm shoot stage)60.1363126.647134.5496.0427
INF1Young developing inflorescences (5mm)3.885724.45564.428343.86992
INF2Developing inflorescences (1-1.5 cm)2.288642.688512.531363.01117
ROORoots from the seedlings (10 cm shoot stage)4.251823.366784.091554.54401
NODDeveloping tillers at six leaf stage, 3rd internode15.813616.900520.116561.5149
CAR5Developing grain, bracts removed (5 DPA)8.973499.9271810.996610.7696
CAR15Developing grain, bracts removed (15 DPA)2.226373.246462.183056.6153



CDS Structure of MLOC_55781






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_55781.5
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK357229NoneNoneNoneNone
MLOC_55781.5CUST_3482_PI427708080AvailableAvailablecontig_40256 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os01g48990.1 -1 0.0 660 327/389 (84%) 13101.m05089 protein uncharacterized kinase mug58, putative, expressed
TAIR PP10 AT1G80380.3 -1 0.0 518 238/335 (71%) P-loop containing nucleoside triphosphate hydrolases superfamily protein | chr1:30217895-30219784 FORWARD LENGTH=364