MLOC_55778 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains03.293611.174141.94674
LEAShoots from the seedlings (10 cm shoot stage)1.558960.2707081.976920.918068
INF1Young developing inflorescences (5mm)0.8935872.775881.216341.36194
INF2Developing inflorescences (1-1.5 cm)6.27891.968872.158094.40853
ROORoots from the seedlings (10 cm shoot stage)0.4829620.7310795.72530.668933
NODDeveloping tillers at six leaf stage, 3rd internode0.144290.08043680.8154480
CAR5Developing grain, bracts removed (5 DPA)0.1265721.098550.5837640.311574
CAR15Developing grain, bracts removed (15 DPA)0.2588030.060286100.180982



CDS Structure of MLOC_55778






Members of Gene Cluster

This cluster has a confidence assignment of non-High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_55778.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_55778.1CUST_5136_PI427708086AvailableAvailablecontig_40254 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6None-----
TAIR PP10None-----