- Predicted Gene MLOC_55747
MLOC_55747 FPKM values
FPKM by Treatment | FPKM by Replicate |
![](/morexGenes/blast_net_images/MLOC_55747_assembly3_WGSMorex_rbca.fasta_treatments.fpkms.png)
| ![](/morexGenes/blast_net_images/MLOC_55747_assembly3_WGSMorex_rbca.fasta_replicates.fpkms.png)
|
Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
---|
EMB | 4-day embryos dissected from germinating grains | 9.90615 | 8.93734 | 8.73198 | 10.7977 |
LEA | Shoots from the seedlings (10 cm shoot stage) | 20.1636 | 5.7523 | 5.73262 | 10.2278 |
INF1 | Young developing inflorescences (5mm) | 71.0119 | 66.7645 | 88.9349 | 70.6486 |
INF2 | Developing inflorescences (1-1.5 cm) | 125.732 | 140.261 | 139.596 | 167.066 |
ROO | Roots from the seedlings (10 cm shoot stage) | 3.49942 | 6.63275 | 7.68237 | 9.93926 |
NOD | Developing tillers at six leaf stage, 3rd internode | 13.4404 | 22.8404 | 7.09599 | 83.3695 |
CAR5 | Developing grain, bracts removed (5 DPA) | 77.5587 | 77.4165 | 72.9504 | 85.3556 |
CAR15 | Developing grain, bracts removed (15 DPA) | 4.40181 | 2.88029 | 6.06772 | 10.5021 |
CDS Structure of MLOC_55747
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_55747.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
Database | Hit | Frame | E-value | Score | % Identity | Description |
---|
Rice PP6 |
LOC_Os12g38440.3 |
-2 |
1e-81 |
263 |
159/358 (44%) |
13112.m03961 protein XH domain containing protein, expressed |
TAIR PP10 |
AT1G15910.1 |
-2 |
1e-22 |
101 |
52/132 (39%) |
XH/XS domain-containing protein | chr1:5465951-5468723 FORWARD LENGTH=634 |