- Predicted Gene MLOC_55724
MLOC_55724 FPKM values
| FPKM by Treatment | FPKM by Replicate |

| 
|
| Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
|---|
| EMB | 4-day embryos dissected from germinating grains | 10.9228 | 9.22905 | 9.86236 | 8.86902 |
| LEA | Shoots from the seedlings (10 cm shoot stage) | 7.7992 | 3.51229 | 5.68097 | 4.25067 |
| INF1 | Young developing inflorescences (5mm) | 0.934916 | 0.62481 | 0.335095 | 0.530939 |
| INF2 | Developing inflorescences (1-1.5 cm) | 0.175278 | 0.463617 | 0.416583 | 0.382662 |
| ROO | Roots from the seedlings (10 cm shoot stage) | 14.5181 | 10.7889 | 11.4921 | 11.2199 |
| NOD | Developing tillers at six leaf stage, 3rd internode | 45.381 | 43.2305 | 45.4324 | 109.787 |
| CAR5 | Developing grain, bracts removed (5 DPA) | 3.55588 | 3.64186 | 3.43687 | 3.44078 |
| CAR15 | Developing grain, bracts removed (15 DPA) | 0.184651 | 0.226044 | 0.300337 | 0.570724 |
CDS Structure of MLOC_55724
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_55724.2
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
| Database | Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Rice PP6 |
LOC_Os03g14030.1 |
-2 |
9e-163 |
479 |
240/313 (77%) |
13103.m01639 protein thaumatin, putative, expressed |
| TAIR PP10 |
AT4G38660.2 |
-2 |
9e-95 |
301 |
163/303 (54%) |
Pathogenesis-related thaumatin superfamily protein | chr4:18066448-18067792 REVERSE LENGTH=323 |