- Predicted Gene MLOC_55703
MLOC_55703 FPKM values
FPKM by Treatment | FPKM by Replicate |
![](/morexGenes/blast_net_images/MLOC_55703_assembly3_WGSMorex_rbca.fasta_treatments.fpkms.png)
| ![](/morexGenes/blast_net_images/MLOC_55703_assembly3_WGSMorex_rbca.fasta_replicates.fpkms.png)
|
Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
---|
EMB | 4-day embryos dissected from germinating grains | 33.4034 | 21.6939 | 25.4141 | 24.3178 |
LEA | Shoots from the seedlings (10 cm shoot stage) | 15.3529 | 1.78847 | 5.35032 | 6.13005 |
INF1 | Young developing inflorescences (5mm) | 9.72567 | 12.8136 | 9.0044 | 9.26335 |
INF2 | Developing inflorescences (1-1.5 cm) | 6.67639 | 5.01517 | 3.51314 | 5.77309 |
ROO | Roots from the seedlings (10 cm shoot stage) | 172.972 | 49.849 | 109.39 | 78.7087 |
NOD | Developing tillers at six leaf stage, 3rd internode | 14.4095 | 18.0324 | 64.8855 | 76.665 |
CAR5 | Developing grain, bracts removed (5 DPA) | 11.3587 | 14.5187 | 10.6081 | 12.0709 |
CAR15 | Developing grain, bracts removed (15 DPA) | 1.72151 | 0.97607 | 1.43142 | 3.4876 |
CDS Structure of MLOC_55703
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_55703.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
Database | Hit | Frame | E-value | Score | % Identity | Description |
---|
Rice PP6 |
LOC_Os07g18750.1 |
-1 |
1e-24 |
99 |
53/75 (71%) |
13107.m01963 protein LTPL42 - Protease inhibitor/seed storage/LTP family protein precursor, expressed |
TAIR PP10 |
AT5G48485.1 |
-1 |
2e-13 |
67 |
26/50 (52%) |
| Symbols: DIR1 | Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein | chr5:19646317-19646625 REVERSE LENGTH=102 |