- Predicted Gene MLOC_55702
MLOC_55702 FPKM values
| FPKM by Treatment | FPKM by Replicate |

| 
|
| Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
|---|
| EMB | 4-day embryos dissected from germinating grains | 10.1162 | 8.13637 | 8.59022 | 8.92607 |
| LEA | Shoots from the seedlings (10 cm shoot stage) | 7.4931 | 6.52659 | 6.98592 | 5.82663 |
| INF1 | Young developing inflorescences (5mm) | 10.6408 | 11.653 | 10.7063 | 9.71949 |
| INF2 | Developing inflorescences (1-1.5 cm) | 9.4545 | 9.57425 | 10.9334 | 11.2806 |
| ROO | Roots from the seedlings (10 cm shoot stage) | 7.52587 | 6.81613 | 7.93734 | 8.48381 |
| NOD | Developing tillers at six leaf stage, 3rd internode | 3.5094 | 3.81244 | 4.06783 | 12.0343 |
| CAR5 | Developing grain, bracts removed (5 DPA) | 6.52206 | 7.24776 | 6.87635 | 7.17852 |
| CAR15 | Developing grain, bracts removed (15 DPA) | 1.70206 | 1.69748 | 1.12143 | 3.86269 |
CDS Structure of MLOC_55702
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_55702.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
| Database | Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Rice PP6 |
LOC_Os02g17520.1 |
+2 |
3e-76 |
238 |
125/139 (90%) |
13102.m01958 protein cytochrome c-type biogenesis protein ccmH precursor, putative, expressed |
| TAIR PP10 |
AT1G15220.2 |
+2 |
9e-61 |
197 |
96/136 (71%) |
| Symbols: ATCCMH, CCMH | cytochrome c biogenesis protein family | chr1:5240471-5241117 REVERSE LENGTH=159 |