MLOC_55695 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains73.747953.731153.426361.3182
LEAShoots from the seedlings (10 cm shoot stage)40.425542.499952.791839.1048
INF1Young developing inflorescences (5mm)49.356648.435754.235143.9416
INF2Developing inflorescences (1-1.5 cm)42.601148.350843.517350.3227
ROORoots from the seedlings (10 cm shoot stage)68.351169.011364.225285.3292
NODDeveloping tillers at six leaf stage, 3rd internode106.93146.493131.635468.538
CAR5Developing grain, bracts removed (5 DPA)42.342343.343743.278143.0312
CAR15Developing grain, bracts removed (15 DPA)14.112412.892513.928633.057



CDS Structure of MLOC_55695






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_55695.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK363047NoneNoneNoneNone
MLOC_55695.1CUST_3466_PI427708080AvailableAvailablecontig_40187 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os05g50840.1 +1 0.0 658 327/353 (93%) 13105.m05463 protein mitochondrial carrier protein, putative, expressed
TAIR PP10 AT4G01100.1 +1 0.0 571 289/355 (81%) | Symbols: ADNT1 | adenine nucleotide transporter 1 | chr4:477411-479590 FORWARD LENGTH=352