MLOC_55675 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains58.633155.815258.486859.208
LEAShoots from the seedlings (10 cm shoot stage)6.715782.926922.92953.46304
INF1Young developing inflorescences (5mm)1.852692.006041.816671.77463
INF2Developing inflorescences (1-1.5 cm)1.65661.853041.964522.15528
ROORoots from the seedlings (10 cm shoot stage)50.782342.675931.812347.7905
NODDeveloping tillers at six leaf stage, 3rd internode19.849212.46413.3519627.4978
CAR5Developing grain, bracts removed (5 DPA)1.620981.035981.123371.29417
CAR15Developing grain, bracts removed (15 DPA)0.9419430.8379210.6679072.22562



CDS Structure of MLOC_55675






Members of Gene Cluster

This cluster has a confidence assignment of non-High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_55675.3
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK251299.1NoneNoneNoneNone
MLOC_55675.3NoneAvailableAvailablecontig_40173 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os06g06290.1 -3 0.0 573 268/345 (78%) 13106.m00645 protein GDSL-like lipase/acylhydrolase, putative, expressed
TAIR PP10 AT5G45910.1 -3 1e-89 285 139/344 (40%) GDSL-like Lipase/Acylhydrolase superfamily protein | chr5:18620420-18622264 REVERSE LENGTH=372