- Predicted Gene MLOC_55669
MLOC_55669 FPKM values
| FPKM by Treatment | FPKM by Replicate |

| 
|
| Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
|---|
| EMB | 4-day embryos dissected from germinating grains | 3.59426 | 3.32376 | 2.64132 | 3.65497 |
| LEA | Shoots from the seedlings (10 cm shoot stage) | 1.17982 | 0.0394178 | 0.297429 | 0.433163 |
| INF1 | Young developing inflorescences (5mm) | 11.7335 | 10.2712 | 8.67352 | 9.60491 |
| INF2 | Developing inflorescences (1-1.5 cm) | 9.66473 | 12.3391 | 9.60888 | 13.6427 |
| ROO | Roots from the seedlings (10 cm shoot stage) | 1.30625 | 1.71293 | 2.13367 | 2.31641 |
| NOD | Developing tillers at six leaf stage, 3rd internode | 0.0957962 | 0.127137 | 0.123736 | 0.419665 |
| CAR5 | Developing grain, bracts removed (5 DPA) | 1.36716 | 1.60188 | 1.13079 | 1.58642 |
| CAR15 | Developing grain, bracts removed (15 DPA) | 0.124384 | 0.0179693 | 0.112687 | 0.221614 |
CDS Structure of MLOC_55669
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_55669.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
| Database | Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Rice PP6 |
LOC_Os01g51230.1 |
-2 |
2e-166 |
488 |
312/441 (71%) |
13101.m05340 protein IQ calmodulin-binding motif domain containing protein, expressed |
| TAIR PP10 |
AT2G26180.1 |
-2 |
2e-63 |
218 |
173/371 (47%) |
| Symbols: IQD6 | IQ-domain 6 | chr2:11143433-11144982 REVERSE LENGTH=416 |