- Predicted Gene MLOC_55662
MLOC_55662 FPKM values
FPKM by Treatment | FPKM by Replicate |
![](/morexGenes/blast_net_images/MLOC_55662_assembly3_WGSMorex_rbca.fasta_treatments.fpkms.png)
| ![](/morexGenes/blast_net_images/MLOC_55662_assembly3_WGSMorex_rbca.fasta_replicates.fpkms.png)
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Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
---|
EMB | 4-day embryos dissected from germinating grains | 340.578 | 299.871 | 280.058 | 330.176 |
LEA | Shoots from the seedlings (10 cm shoot stage) | 152.729 | 74.7614 | 98.3471 | 98.1724 |
INF1 | Young developing inflorescences (5mm) | 454.496 | 420.136 | 424.415 | 401.872 |
INF2 | Developing inflorescences (1-1.5 cm) | 348.105 | 349.106 | 348.586 | 400.559 |
ROO | Roots from the seedlings (10 cm shoot stage) | 363.967 | 287.068 | 296.577 | 397.422 |
NOD | Developing tillers at six leaf stage, 3rd internode | 22.6704 | 33.0447 | 64.5195 | 140.805 |
CAR5 | Developing grain, bracts removed (5 DPA) | 235.029 | 231.635 | 217.978 | 235.588 |
CAR15 | Developing grain, bracts removed (15 DPA) | 86.4867 | 80.5774 | 74.9946 | 201.885 |
CDS Structure of MLOC_55662
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_55662.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
Database | Hit | Frame | E-value | Score | % Identity | Description |
---|
Rice PP6 |
LOC_Os07g42450.1 |
-3 |
7e-149 |
432 |
246/305 (81%) |
13107.m04437 protein ribosomal protein S2, putative, expressed |
TAIR PP10 |
AT1G72370.2 |
-3 |
2e-128 |
379 |
197/242 (81%) |
| Symbols: P40, AP40, RP40, RPSAA | 40s ribosomal protein SA | chr1:27243148-27244842 REVERSE LENGTH=294 |