- Predicted Gene MLOC_55658
MLOC_55658 FPKM values
| FPKM by Treatment | FPKM by Replicate |
|---|
| 
|
| Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
|---|
| EMB | 4-day embryos dissected from germinating grains | 15.7387 | 23.5121 | 23.5894 | 22.3262 |
| LEA | Shoots from the seedlings (10 cm shoot stage) | 23.3646 | 22.6057 | 18.9928 | 19.4487 |
| INF1 | Young developing inflorescences (5mm) | 41.8578 | 41.3365 | 46.4907 | 36.2024 |
| INF2 | Developing inflorescences (1-1.5 cm) | 45.0348 | 51.1375 | 43.8603 | 51.4476 |
| ROO | Roots from the seedlings (10 cm shoot stage) | 13.7459 | 22.7683 | 21.481 | 27.4351 |
| NOD | Developing tillers at six leaf stage, 3rd internode | 15.4038 | 14.0748 | 12.4918 | 49.4899 |
| CAR5 | Developing grain, bracts removed (5 DPA) | 29.1561 | 27.2026 | 29.0868 | 27.3072 |
| CAR15 | Developing grain, bracts removed (15 DPA) | 14.6594 | 13.126 | 14.2528 | 31.4255 |
CDS Structure of MLOC_55658
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_55658.4
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
| Database | Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Rice PP6 |
LOC_Os03g57160.1 |
+1 |
0.0 |
1377 |
744/961 (77%) |
13103.m06264 protein zinc ion binding protein, putative, expressed |
| TAIR PP10 |
AT1G17210.1 |
+1 |
0.0 |
729 |
458/935 (49%) |
| Symbols: ATILP1, ILP1 | IAP-like protein 1 | chr1:5880502-5884657 REVERSE LENGTH=958 |
