MLOC_55645 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains0000
LEAShoots from the seedlings (10 cm shoot stage)0000
INF1Young developing inflorescences (5mm)0000
INF2Developing inflorescences (1-1.5 cm)0000
ROORoots from the seedlings (10 cm shoot stage)0.186091.003951.308821.22502
NODDeveloping tillers at six leaf stage, 3rd internode0000
CAR5Developing grain, bracts removed (5 DPA)0000
CAR15Developing grain, bracts removed (15 DPA)000.05628690.0948942



CDS Structure of MLOC_55645






Members of Gene Cluster

This cluster has a confidence assignment of non-High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_55645.2
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_55645.2CUST_7741_PI427708083AvailableAvailablecontig_40147 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os06g28124.1 -1 4e-114 346 186/326 (57%) 13106.m02900 protein glycosyltransferase, putative, expressed
TAIR PP10 AT3G18180.1 -1 1e-27 112 55/172 (32%) Glycosyltransferase family 61 protein | chr3:6230270-6231878 FORWARD LENGTH=470