MLOC_55644 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains0000
LEAShoots from the seedlings (10 cm shoot stage)0000
INF1Young developing inflorescences (5mm)0000
INF2Developing inflorescences (1-1.5 cm)0000
ROORoots from the seedlings (10 cm shoot stage)0.5286421.013740.3923581.23242
NODDeveloping tillers at six leaf stage, 3rd internode0000
CAR5Developing grain, bracts removed (5 DPA)0000
CAR15Developing grain, bracts removed (15 DPA)0000



CDS Structure of MLOC_55644






Members of Gene Cluster

This cluster has a confidence assignment of non-High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_55644.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_55644.1CUST_7740_PI427708083AvailableAvailablecontig_40147 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os06g28124.1 -1 5e-71 230 113/175 (65%) 13106.m02900 protein glycosyltransferase, putative, expressed
TAIR PP10 AT3G18170.1 -1 5e-36 133 69/173 (40%) Glycosyltransferase family 61 protein | chr3:6228393-6229547 FORWARD LENGTH=384