MLOC_55643 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains25.80321.869222.526120.7004
LEAShoots from the seedlings (10 cm shoot stage)16.704413.759118.646613.1898
INF1Young developing inflorescences (5mm)20.956822.126820.838816.0365
INF2Developing inflorescences (1-1.5 cm)13.053613.799114.372313.3557
ROORoots from the seedlings (10 cm shoot stage)25.238119.78721.529123.1231
NODDeveloping tillers at six leaf stage, 3rd internode5.529949.388648.4107528.7241
CAR5Developing grain, bracts removed (5 DPA)27.542428.863231.885225.0838
CAR15Developing grain, bracts removed (15 DPA)7.95387.392468.6755215.9037



CDS Structure of MLOC_55643






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by AK251848.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK251848.1CUST_19078_PI427708080NoneNoneNone
MLOC_55643.1NoneAvailableAvailablecontig_40146 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6None-----
TAIR PP10None-----