- Predicted Gene MLOC_55623
MLOC_55623 FPKM values
| FPKM by Treatment | FPKM by Replicate |

| 
|
| Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
|---|
| EMB | 4-day embryos dissected from germinating grains | 19.5663 | 46.95 | 41.1967 | 36.0503 |
| LEA | Shoots from the seedlings (10 cm shoot stage) | 77.1341 | 101.209 | 74.5224 | 68.8947 |
| INF1 | Young developing inflorescences (5mm) | 51.4615 | 56.7284 | 55.4132 | 42.7221 |
| INF2 | Developing inflorescences (1-1.5 cm) | 77.0307 | 75.0802 | 66.5881 | 76.2726 |
| ROO | Roots from the seedlings (10 cm shoot stage) | 38.6777 | 73.4844 | 54.3459 | 75.4284 |
| NOD | Developing tillers at six leaf stage, 3rd internode | 65.5214 | 81.1553 | 66.8772 | 258.336 |
| CAR5 | Developing grain, bracts removed (5 DPA) | 66.9341 | 59.3365 | 59.1132 | 55.8464 |
| CAR15 | Developing grain, bracts removed (15 DPA) | 41.5351 | 39.7728 | 38.1445 | 85.5881 |
CDS Structure of MLOC_55623
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_55623.2
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
| Database | Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Rice PP6 |
LOC_Os01g05500.2 |
+3 |
0.0 |
1492 |
835/1240 (67%) |
13101.m00525 protein zinc finger protein, putative, expressed |
| TAIR PP10 |
AT5G02310.1 |
+3 |
0.0 |
853 |
526/1252 (42%) |
| Symbols: PRT6 | proteolysis 6 | chr5:474279-482552 FORWARD LENGTH=2006 |