- Predicted Gene MLOC_55616
MLOC_55616 FPKM values
| FPKM by Treatment | FPKM by Replicate |

| 
|
| Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
|---|
| EMB | 4-day embryos dissected from germinating grains | 10.7278 | 11.5012 | 13.1723 | 12.0177 |
| LEA | Shoots from the seedlings (10 cm shoot stage) | 20.9836 | 25.5041 | 39.1578 | 24.1108 |
| INF1 | Young developing inflorescences (5mm) | 8.55309 | 7.75957 | 8.58468 | 7.34507 |
| INF2 | Developing inflorescences (1-1.5 cm) | 4.90374 | 5.42552 | 5.85685 | 6.19564 |
| ROO | Roots from the seedlings (10 cm shoot stage) | 20.4938 | 17.8581 | 17.7419 | 21.8534 |
| NOD | Developing tillers at six leaf stage, 3rd internode | 83.5755 | 76.9049 | 48.7681 | 208.453 |
| CAR5 | Developing grain, bracts removed (5 DPA) | 10.5803 | 9.96868 | 9.37259 | 10.3954 |
| CAR15 | Developing grain, bracts removed (15 DPA) | 2.54783 | 2.26638 | 2.74112 | 6.09767 |
CDS Structure of MLOC_55616
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_55616.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
| Database | Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Rice PP6 |
LOC_Os02g56550.1 |
+3 |
3e-171 |
501 |
254/281 (90%) |
13102.m06498 protein ABC transporter, ATP-binding protein, putative, expressed |
| TAIR PP10 |
AT1G03905.1 |
+3 |
7e-142 |
425 |
221/279 (79%) |
P-loop containing nucleoside triphosphate hydrolases superfamily protein | chr1:993478-995594 FORWARD LENGTH=290 |