MLOC_55615 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains0.8915310.7614130.8959660.897693
LEAShoots from the seedlings (10 cm shoot stage)1.268042.074132.888691.93902
INF1Young developing inflorescences (5mm)0000
INF2Developing inflorescences (1-1.5 cm)000.03491460.0520082
ROORoots from the seedlings (10 cm shoot stage)1.271941.056160.8548771.35576
NODDeveloping tillers at six leaf stage, 3rd internode0.0119440.04561690.04714230.159052
CAR5Developing grain, bracts removed (5 DPA)0.03378550.015881500.0264345
CAR15Developing grain, bracts removed (15 DPA)0.01336750.030456500.0758409



CDS Structure of MLOC_55615






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_55615.4
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK371223NoneNoneNoneNone
MLOC_55615.4CUST_3451_PI427708080AvailableAvailablecontig_40117 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os02g56630.1 +1 0.0 957 504/755 (67%) 13102.m06508 protein OsWAK24 - OsWAK receptor-like protein kinase
TAIR PP10 AT1G21270.1 +1 1e-158 483 291/738 (39%) | Symbols: WAK2 | wall-associated kinase 2 | chr1:7444997-7447345 FORWARD LENGTH=732