MLOC_55608 FPKM values

FPKM by TreatmentFPKM by Replicate
There are no FPKM-by-treatment values calculated for this gene.


Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains17.423461.757141.14410
LEAShoots from the seedlings (10 cm shoot stage)85.101649.711743.01450
INF1Young developing inflorescences (5mm)73.102265.960162.08830
INF2Developing inflorescences (1-1.5 cm)74.560488.189867.22260
ROORoots from the seedlings (10 cm shoot stage)6.9665624.808711.29590
NODDeveloping tillers at six leaf stage, 3rd internode26.068825.40626.19360
CAR5Developing grain, bracts removed (5 DPA)92.487772.72583.28620
CAR15Developing grain, bracts removed (15 DPA)41.291438.039136.25930



CDS Structure of MLOC_55608






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by AK249251.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK249251.1CUST_18668_PI427708080NoneNoneNone
MLOC_34595.1NoneAvailableAvailablecontig_244216 (Mapped)
MLOC_47861.1NoneAvailableNonecontig_31350 (Not mapped)
MLOC_55608.1NoneAvailableNonecontig_40106 (Mapped)
MLOC_79760.1NoneAvailableNonecontig_86837 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6None-----
TAIR PP10None-----