- Predicted Gene MLOC_55594
MLOC_55594 FPKM values
FPKM by Treatment | FPKM by Replicate |
![](/morexGenes/blast_net_images/MLOC_55594_assembly3_WGSMorex_rbca.fasta_treatments.fpkms.png)
| ![](/morexGenes/blast_net_images/MLOC_55594_assembly3_WGSMorex_rbca.fasta_replicates.fpkms.png)
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Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
---|
EMB | 4-day embryos dissected from germinating grains | 82.5428 | 85.0649 | 85.3236 | 80.6107 |
LEA | Shoots from the seedlings (10 cm shoot stage) | 61.2633 | 38.8561 | 41.1658 | 39.6004 |
INF1 | Young developing inflorescences (5mm) | 65.3262 | 61.1972 | 61.7322 | 50.9843 |
INF2 | Developing inflorescences (1-1.5 cm) | 35.4171 | 41.8345 | 37.1013 | 41.2474 |
ROO | Roots from the seedlings (10 cm shoot stage) | 35.0259 | 49.4945 | 46.8853 | 53.8312 |
NOD | Developing tillers at six leaf stage, 3rd internode | 19.9466 | 13.1548 | 14.9303 | 46.9549 |
CAR5 | Developing grain, bracts removed (5 DPA) | 99.3283 | 105.344 | 108.65 | 98.7267 |
CAR15 | Developing grain, bracts removed (15 DPA) | 31.2869 | 25.4698 | 27.3828 | 63.0622 |
CDS Structure of MLOC_55594
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_55594.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
Database | Hit | Frame | E-value | Score | % Identity | Description |
---|
Rice PP6 |
LOC_Os03g18590.1 |
+2 |
0.0 |
538 |
302/369 (82%) |
13103.m02229 protein malonyl CoA-acyl carrier protein transacylase, mitochondrial precursor, putative, expressed |
TAIR PP10 |
AT2G30200.1 |
+2 |
1e-176 |
507 |
267/314 (85%) |
catalytics;transferases;[acyl-carrier-protein] S-malonyltransferases;binding | chr2:12883162-12885482 REVERSE LENGTH=393 |