- Predicted Gene MLOC_55587
MLOC_55587 FPKM values
| FPKM by Treatment | FPKM by Replicate |

| 
|
| Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
|---|
| EMB | 4-day embryos dissected from germinating grains | 1.17212 | 1.30128 | 1.14649 | 1.2268 |
| LEA | Shoots from the seedlings (10 cm shoot stage) | 7.69029 | 10.6721 | 10.7018 | 7.76585 |
| INF1 | Young developing inflorescences (5mm) | 1.96927 | 2.30407 | 2.06461 | 1.76178 |
| INF2 | Developing inflorescences (1-1.5 cm) | 1.39715 | 1.77841 | 2.19183 | 1.86917 |
| ROO | Roots from the seedlings (10 cm shoot stage) | 0.538491 | 0.520926 | 0.506953 | 0.603937 |
| NOD | Developing tillers at six leaf stage, 3rd internode | 5.15254 | 5.48017 | 7.69677 | 17.1608 |
| CAR5 | Developing grain, bracts removed (5 DPA) | 1.77407 | 2.14188 | 2.45864 | 2.01265 |
| CAR15 | Developing grain, bracts removed (15 DPA) | 0.39069 | 0.45655 | 0.647299 | 1.08664 |
CDS Structure of MLOC_55587
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_55587.3
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
| Database | Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Rice PP6 |
LOC_Os07g09370.1 |
-2 |
0.0 |
750 |
402/470 (86%) |
13107.m00945 protein pentatricopeptide, putative, expressed |
| TAIR PP10 |
AT1G59720.1 |
-2 |
6e-160 |
491 |
258/455 (57%) |
| Symbols: CRR28 | Tetratricopeptide repeat (TPR)-like superfamily protein | chr1:21939868-21941784 REVERSE LENGTH=638 |