MLOC_55586 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains0.8262871.654852.254091.33137
LEAShoots from the seedlings (10 cm shoot stage)0.2306220.4695040.1228210.200022
INF1Young developing inflorescences (5mm)0.1298510.08534770.105250.079459
INF2Developing inflorescences (1-1.5 cm)0.1066310.06592040.09632210.0833355
ROORoots from the seedlings (10 cm shoot stage)3.34947.745818.444477.48536
NODDeveloping tillers at six leaf stage, 3rd internode0.03803810.1084360.03545260.287809
CAR5Developing grain, bracts removed (5 DPA)00.07772770.04799960.0353724
CAR15Developing grain, bracts removed (15 DPA)0000



CDS Structure of MLOC_55586






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_55586.4
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_55586.4CUST_13400_PI427708080AvailableAvailablecontig_40087 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os01g36580.1 +3 4e-132 391 204/333 (61%) 13101.m03704 protein auxin-induced protein 5NG4, putative, expressed
TAIR PP10 AT5G64700.1 +3 6e-85 269 148/336 (44%) nodulin MtN21 /EamA-like transporter family protein | chr5:25865190-25866845 REVERSE LENGTH=359