MLOC_55580 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains11.08968.683959.472069.0362
LEAShoots from the seedlings (10 cm shoot stage)58.55885.934799.780965.6113
INF1Young developing inflorescences (5mm)23.679423.830724.399717.9255
INF2Developing inflorescences (1-1.5 cm)11.723515.095415.230714.5502
ROORoots from the seedlings (10 cm shoot stage)3.58064.50635.197485.12576
NODDeveloping tillers at six leaf stage, 3rd internode15.073910.01487.7660833.483
CAR5Developing grain, bracts removed (5 DPA)10.991912.191713.084311.0962
CAR15Developing grain, bracts removed (15 DPA)1.101341.631332.007783.12089



CDS Structure of MLOC_55580






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by AK353559
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK353559CUST_19237_PI427708080NoneNoneNone
MLOC_26738.1NoneAvailableNonecontig_177617 (Not mapped)
MLOC_36263.1NoneAvailableNonecontig_254274 (Mapped)
MLOC_55580.1NoneAvailableAvailablecontig_400822 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6None-----
TAIR PP10None-----