MLOC_55578 FPKM values

FPKM by TreatmentFPKM by Replicate
There are no FPKM-by-treatment values calculated for this gene.


Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains2.46398000
LEAShoots from the seedlings (10 cm shoot stage)001.702690
INF1Young developing inflorescences (5mm)00.9688661.20440
INF2Developing inflorescences (1-1.5 cm)00.8011781.188290
ROORoots from the seedlings (10 cm shoot stage)0000
NODDeveloping tillers at six leaf stage, 3rd internode1.55482.88650.3093440
CAR5Developing grain, bracts removed (5 DPA)1.142660.99860400
CAR15Developing grain, bracts removed (15 DPA)0000



CDS Structure of MLOC_55578






Members of Gene Cluster

This cluster has a confidence assignment of non-High Confidence.

The gene has a transcript that is part of a cluster represented by AK252526.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK252526.1NoneNoneNoneNone
MLOC_27125.1NoneAvailableNonecontig_1807998 (Not mapped)
MLOC_33500.1NoneAvailableNonecontig_2379171 (Not mapped)
MLOC_47438.1NoneAvailableAvailablecontig_306081 (Mapped)
MLOC_47582.1NoneAvailableNonecontig_308503 (Mapped)
MLOC_55578.1NoneAvailableNonecontig_400796 (Mapped)
MLOC_63216.1NoneAvailableNonecontig_474007 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6None-----
TAIR PP10None-----