- Predicted Gene MLOC_55539
MLOC_55539 FPKM values
| FPKM by Treatment | FPKM by Replicate |

| 
|
| Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
|---|
| EMB | 4-day embryos dissected from germinating grains | 8.15979 | 5.91712 | 6.23784 | 7.01832 |
| LEA | Shoots from the seedlings (10 cm shoot stage) | 4.96254 | 3.6605 | 5.86283 | 4.39158 |
| INF1 | Young developing inflorescences (5mm) | 4.55032 | 6.68774 | 7.11583 | 5.63551 |
| INF2 | Developing inflorescences (1-1.5 cm) | 13.1384 | 9.09544 | 8.96918 | 11.6297 |
| ROO | Roots from the seedlings (10 cm shoot stage) | 11.0958 | 7.48211 | 7.50028 | 10.8209 |
| NOD | Developing tillers at six leaf stage, 3rd internode | 11.9459 | 16.1394 | 27.4445 | 54.6897 |
| CAR5 | Developing grain, bracts removed (5 DPA) | 7.54784 | 7.45023 | 8.09513 | 7.98248 |
| CAR15 | Developing grain, bracts removed (15 DPA) | 3.66679 | 2.82192 | 2.5335 | 7.84471 |
CDS Structure of MLOC_55539
Members of Gene Cluster
This cluster has a confidence assignment of
non-High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_55539.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
| Database | Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Rice PP6 |
LOC_Os05g05280.1 |
-2 |
3e-19 |
89 |
49/70 (70%) |
13105.m00547 protein zinc finger family protein, putative, expressed |
| TAIR PP10 | None | - | - | - | - | - |