MLOC_55538 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains36.02431.737235.134536.5239
LEAShoots from the seedlings (10 cm shoot stage)24.050638.589653.29733.879
INF1Young developing inflorescences (5mm)15.763118.463919.038416.5024
INF2Developing inflorescences (1-1.5 cm)21.182820.664423.737425.6117
ROORoots from the seedlings (10 cm shoot stage)42.845834.094332.043942.6654
NODDeveloping tillers at six leaf stage, 3rd internode23.322632.057138.352101.261
CAR5Developing grain, bracts removed (5 DPA)37.152240.551139.741142.2316
CAR15Developing grain, bracts removed (15 DPA)18.984918.227918.127746.5735



CDS Structure of MLOC_55538






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by AK370764
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK370764CUST_22014_PI427708080NoneNoneNone
MLOC_55538.2NoneAvailableAvailablecontig_40051 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6None-----
TAIR PP10None-----