- Predicted Gene MLOC_55536
MLOC_55536 FPKM values
| FPKM by Treatment | FPKM by Replicate |

| 
|
| Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
|---|
| EMB | 4-day embryos dissected from germinating grains | 7.50991 | 19.7519 | 15.8291 | 12.7932 |
| LEA | Shoots from the seedlings (10 cm shoot stage) | 23.3836 | 15.4922 | 14.3276 | 13.9026 |
| INF1 | Young developing inflorescences (5mm) | 40.6547 | 36.917 | 33.7067 | 26.3939 |
| INF2 | Developing inflorescences (1-1.5 cm) | 38.6734 | 35.0217 | 32.3691 | 33.5247 |
| ROO | Roots from the seedlings (10 cm shoot stage) | 6.80663 | 15.1605 | 11.8185 | 13.6231 |
| NOD | Developing tillers at six leaf stage, 3rd internode | 8.24686 | 10.9423 | 11.5827 | 34.0791 |
| CAR5 | Developing grain, bracts removed (5 DPA) | 23.1504 | 20.8824 | 22.2994 | 17.748 |
| CAR15 | Developing grain, bracts removed (15 DPA) | 16.3216 | 14.0078 | 13.3609 | 27.7084 |
CDS Structure of MLOC_55536
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_55536.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
| Database | Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Rice PP6 |
LOC_Os01g74610.1 |
-2 |
0.0 |
2554 |
1364/1867 (73%) |
13101.m08157 protein zinc finger, C3HC4 type domain containing protein, expressed |
| TAIR PP10 |
AT5G58410.1 |
-2 |
0.0 |
1269 |
763/1901 (40%) |
HEAT/U-box domain-containing protein | chr5:23609663-23617343 FORWARD LENGTH=1873 |