- Predicted Gene MLOC_55523
MLOC_55523 FPKM values
| FPKM by Treatment | FPKM by Replicate |

| 
|
| Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
|---|
| EMB | 4-day embryos dissected from germinating grains | 14.9705 | 17.0409 | 17.5431 | 15.0854 |
| LEA | Shoots from the seedlings (10 cm shoot stage) | 14.6591 | 13.932 | 14.2481 | 11.5912 |
| INF1 | Young developing inflorescences (5mm) | 18.4128 | 21.7532 | 23.9943 | 15.7585 |
| INF2 | Developing inflorescences (1-1.5 cm) | 20.5925 | 23.2962 | 20.3234 | 21.2979 |
| ROO | Roots from the seedlings (10 cm shoot stage) | 12.5416 | 17.6766 | 17.8526 | 19.1884 |
| NOD | Developing tillers at six leaf stage, 3rd internode | 18.2388 | 19.1498 | 15.9272 | 59.844 |
| CAR5 | Developing grain, bracts removed (5 DPA) | 20.1281 | 20.1449 | 21.356 | 17.7465 |
| CAR15 | Developing grain, bracts removed (15 DPA) | 6.12252 | 6.40106 | 6.46714 | 12.5549 |
CDS Structure of MLOC_55523
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_55523.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
| Database | Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Rice PP6 |
LOC_Os10g37410.1 |
-3 |
0.0 |
587 |
325/457 (71%) |
13110.m03391 protein TBC domain containing protein, expressed |
| TAIR PP10 |
AT5G41940.1 |
-3 |
3e-130 |
407 |
232/415 (56%) |
Ypt/Rab-GAP domain of gyp1p superfamily protein | chr5:16782039-16785451 FORWARD LENGTH=549 |