- Predicted Gene MLOC_55522
MLOC_55522 FPKM values
| FPKM by Treatment | FPKM by Replicate |

| 
|
| Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
|---|
| EMB | 4-day embryos dissected from germinating grains | 1.33032 | 2.07337 | 1.7201 | 1.90469 |
| LEA | Shoots from the seedlings (10 cm shoot stage) | 3.68516 | 5.74923 | 5.79541 | 4.25855 |
| INF1 | Young developing inflorescences (5mm) | 0.386601 | 0.507156 | 0.46379 | 0.403353 |
| INF2 | Developing inflorescences (1-1.5 cm) | 0.28406 | 0.254739 | 0.372494 | 0.344522 |
| ROO | Roots from the seedlings (10 cm shoot stage) | 5.36669 | 5.37267 | 4.65436 | 6.53686 |
| NOD | Developing tillers at six leaf stage, 3rd internode | 4.9237 | 4.59558 | 6.62786 | 14.5943 |
| CAR5 | Developing grain, bracts removed (5 DPA) | 3.49865 | 4.58494 | 3.51511 | 4.15118 |
| CAR15 | Developing grain, bracts removed (15 DPA) | 3.49072 | 3.82042 | 2.84695 | 8.76039 |
CDS Structure of MLOC_55522
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_55522.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
| Database | Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Rice PP6 |
LOC_Os10g37430.1 |
-2 |
0.0 |
679 |
355/443 (80%) |
13110.m03394 protein expressed protein |
| TAIR PP10 |
AT5G41950.1 |
-2 |
0.0 |
544 |
276/383 (72%) |
Tetratricopeptide repeat (TPR)-like superfamily protein | chr5:16785825-16789360 FORWARD LENGTH=565 |