- Predicted Gene MLOC_55521
MLOC_55521 FPKM values
| FPKM by Treatment | FPKM by Replicate |
|---|
| 
|
| Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
|---|
| EMB | 4-day embryos dissected from germinating grains | 58.6546 | 51.3291 | 44.1884 | 51.9386 |
| LEA | Shoots from the seedlings (10 cm shoot stage) | 45.9901 | 40.6204 | 55.9365 | 38.0032 |
| INF1 | Young developing inflorescences (5mm) | 24.9243 | 26.675 | 29.2666 | 24.4042 |
| INF2 | Developing inflorescences (1-1.5 cm) | 14.2804 | 16.1674 | 14.0128 | 17.6318 |
| ROO | Roots from the seedlings (10 cm shoot stage) | 53.674 | 55.8723 | 51.6492 | 61.4371 |
| NOD | Developing tillers at six leaf stage, 3rd internode | 77.1684 | 80.0496 | 84.8209 | 215.914 |
| CAR5 | Developing grain, bracts removed (5 DPA) | 27.8671 | 34.2082 | 25.039 | 31.1982 |
| CAR15 | Developing grain, bracts removed (15 DPA) | 14.4118 | 15.5607 | 10.6718 | 36.9245 |
CDS Structure of MLOC_55521
Members of Gene Cluster
This cluster has a confidence assignment of
non-High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_55521.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
| Database | Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Rice PP6 |
LOC_Os10g37420.2 |
+3 |
7e-70 |
224 |
112/134 (84%) |
13110.m03392 protein cytochrome b5-like Heme/Steroid binding domain containing protein, expressed |
| TAIR PP10 |
AT5G53560.1 |
+3 |
8e-61 |
200 |
91/134 (68%) |
| Symbols: ATB5-A, B5 #2, ATCB5-E, CB5-E | cytochrome B5 isoform E | chr5:21759628-21760353 FORWARD LENGTH=134 |
