MLOC_55516 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains1.885252.601451.843172.36711
LEAShoots from the seedlings (10 cm shoot stage)1.0921310.556621.918810.3507
INF1Young developing inflorescences (5mm)1.884832.008732.75391.8963
INF2Developing inflorescences (1-1.5 cm)1.948772.112532.364522.38268
ROORoots from the seedlings (10 cm shoot stage)4.394853.531184.19684.78894
NODDeveloping tillers at six leaf stage, 3rd internode0.01412250.02777520.039560.102154
CAR5Developing grain, bracts removed (5 DPA)0.5968960.5972490.7198390.642559
CAR15Developing grain, bracts removed (15 DPA)0.146790.2256860.09589260.402477



CDS Structure of MLOC_55516






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_55516.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK252207.1NoneNoneNoneNone
MLOC_55516.1CUST_3423_PI427708080AvailableAvailablecontig_40038 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os01g08110.1 -1 0.0 749 363/477 (76%) 13101.m00839 protein flavonol-3-O-glycoside-7-O-glucosyltransferase 1, putative, expressed
TAIR PP10 AT2G36750.1 -1 2e-138 426 212/481 (44%) | Symbols: UGT73C1 | UDP-glucosyl transferase 73C1 | chr2:15410531-15412006 REVERSE LENGTH=491