MLOC_55502 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains0.07902730.06982620.214350.105103
LEAShoots from the seedlings (10 cm shoot stage)0.4131890.06570130.05483340.161247
INF1Young developing inflorescences (5mm)6.836838.013758.64256.11503
INF2Developing inflorescences (1-1.5 cm)8.380889.643628.584399.40007
ROORoots from the seedlings (10 cm shoot stage)0.1033490.131850.1817860.161274
NODDeveloping tillers at six leaf stage, 3rd internode0.532821.022870.8784983.212
CAR5Developing grain, bracts removed (5 DPA)2.222692.59142.592312.28467
CAR15Developing grain, bracts removed (15 DPA)0.1285510.09576160.05378240.228263



CDS Structure of MLOC_55502






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_55502.2
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_55502.2CUST_13386_PI427708080AvailableAvailablecontig_40026 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os11g38340.1 -3 3e-52 193 134/379 (35%) 13111.m03765 protein hypothetical protein
TAIR PP10None-----