MLOC_55501 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains1.431650.40134600.83961
LEAShoots from the seedlings (10 cm shoot stage)1.2059800.3016440.673612
INF1Young developing inflorescences (5mm)0.4373960.872682.19670.542916
INF2Developing inflorescences (1-1.5 cm)0.60108800.5847660.520737
ROORoots from the seedlings (10 cm shoot stage)00.4178700.80844
NODDeveloping tillers at six leaf stage, 3rd internode0.8363670.2969080.4768120.780975
CAR5Developing grain, bracts removed (5 DPA)0.7448171.156321.065310.694388
CAR15Developing grain, bracts removed (15 DPA)00.21307900.327284



CDS Structure of MLOC_55501






Members of Gene Cluster

This cluster has a confidence assignment of non-High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_55501.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_55501.1NoneAvailableAvailablecontig_40026 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6None-----
TAIR PP10None-----